Theory-driven analysis for ecological data

FRB-CESAB & GdR TheoMoDive training course

Nicolas Casajus https://nicolascasajus.fr (FRB-CESAB)https://www.fondationbiodiversite.fr/en/about-the-foundation/le-cesab/ , Vincent Calcagno https://vcalcagnoresearch.wordpress.com/ (INRAE Institut Sophia Agrobiotech)https://www6.paca.inrae.fr/institut-sophia-agrobiotech , Emanuel A. Fronhofer https://www.emanuelfronhofer.net/ (CNRS ISEM)https://isem-evolution.fr/en/ , Isabelle Gounand https://isabellegounand.wordpress.com/ (CNRS iEES-Paris)https://iees-paris.fr/teams/interaction-networks/ , Claire Jacquet https://clairejacquet.weebly.com/ (CNRS ISEM)https://isem-evolution.fr/en/ , Sonia Kéfi https://scholar.google.nl/citations?user=JcRmX4EAAAAJ&hl=fr (CNRS ISEM)https://isem-evolution.fr/en/ , François Massol https://sites.google.com/a/polytechnique.org/francoismassol/home (CNRS CIIL)https://www.ciil.fr/
03-15-2024

  Pre-registration opens each spring and training course is provided each winter. Subscribe to the FRB-CESAB newsletter to stay informed. More information is available on the FRB-CESAB website.


The objective of this five-day workshop, co-organized by the FRB-CESAB and the GdR TheoMoDive is to train young researchers in theory-based approaches to model ecological data (e.g. temporal series, macroecology, interaction and trophic network, etc.).

N.B. This training course is in English and slides are available in the tab Courses/.


Program

Monday Speakers: Isabelle Gounand, Sonia Kéfi & Vincent Calcagno
Icebreaker & Introduction to the week
Mathematical modeling & Theory SLIDESSLIDESSLIDES
Guest seminar: Kim Cuddington (Waterloo Univ., Canada) SLIDES
Tuesday Speakers: Emanuel Fronhofer & Jhelam Deshpande
Temporal series and dynamics in ecology SLIDES
Wednesday Speakers: Vincent Calcagno & Quentin Petitjean
Spatial data, macro-ecology and co-occurrences SLIDES
Guest seminar: Davide Martinetti (INRAE, Avignon) SLIDES
Thursday Speakers: François Massol & Claire Jacquet
Interaction networks, trophic networks & complexity SLIDESSLIDES
Guest speaker: Matthieu Barbier (CIRAD, Montpellier & INTP) SLIDES
Guest seminar: Sonia Kéfi (CNRS, Montpellier) SLIDES
Friday Subgroups projects


Prerequisites

If you want ready-to-use working environment for R, follow this tutorial. For this course, you don’t need to install git and Docker.


See also

Discover the other training courses provided by the FRB-CESAB and its partners: https://frbcesab.github.io/training-courses/

Citation

Casajus N, Calcagno V, Fronhofer EA, Gounand I, Jacquet C, Kéfi C & Massol F (2024) FRB-CESAB & GdR TheoMoDive training course: Theory-driven analysis for ecological data.

Corrections

If you see mistakes or want to suggest changes, please create an issue on the source repository.

Reuse

Text and figures are licensed under Creative Commons Attribution CC BY 4.0. Source code is available at https://github.com/theodatasci/theodatasci.github.io, unless otherwise noted. The figures that have been reused from other sources don't fall under this license and can be recognized by a note in their caption: "Figure from ...".